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Animation of β-Lactam antibiotic (Penicillin peptidase)

Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua. Quis imperdiet massa tincidunt nunc pulvinar sapien et ligula. Tortor posuere ac ut consequat semper viverra nam. Cras fermentum odio eu feugiat pretium nibh ipsum. Et ultrices neque ornare aenean euismod. Platea dictumst quisque sagittis purus sit amet volutpat consequat. Leo integer malesuada nunc vel risus commodo viverra maecenas accumsan. Turpis cursus in hac habitasse platea dictumst quisque sagittis. In arcu cursus euismod quis viverra nibh. Non arcu risus quis varius quam quisque id. Dolor magna eget est lorem. Nec dui nunc mattis enim ut tellus elementum sagittis. Praesent elementum facilisis leo vel. Volutpat odio facilisis mauris sit amet. Eget egestas purus viverra accumsan in.

Viverra justo nec ultrices dui sapien. Dignissim convallis aenean et tortor. Scelerisque fermentum dui faucibus in ornare quam viverra. Penatibus et magnis dis parturient montes. Vestibulum rhoncus est pellentesque elit. Amet consectetur adipiscing elit pellentesque habitant morbi tristique senectus. Tortor pretium viverra suspendisse potenti nullam ac tortor vitae. Venenatis tellus in metus vulputate eu scelerisque felis. Tellus elementum sagittis vitae et leo duis ut diam. Consectetur adipiscing elit ut aliquam purus sit amet. Purus sit amet luctus venenatis lectus magna. Pellentesque habitant morbi tristique senectus et netus et malesuada. At urna condimentum mattis pellentesque id nibh tortor id aliquet.

test/penicillin_DD-peptidase_stepAna
UUID
a0e8f023-bd02-47d0-8815-36b8cea87063

Kevlar showing hydrogen bonds

Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua. Justo nec ultrices dui sapien eget mi proin sed libero. Suspendisse ultrices gravida dictum fusce ut placerat orci nulla pellentesque.

Massa vitae tortor condimentum lacinia quis vel eros. Mauris vitae ultricies leo integer. Etiam tempor orci eu lobortis elementum nibh tellus molestie. Tincidunt tortor aliquam nulla facilisi cras fermentum odio. 

Kevlar is very strong

test/KevlarWithHbonds
UUID
dce1d5f7-d1b9-4d17-a5be-9a30cc53ebe2

3D difference between R-alanine and S-alanine

R-alanine and S-alanine are two stereoisomers of alanine, an amino acid. Stereoisomers are molecules that have the same chemical formula and bond structure but differ in the arrangement of their atoms in space.

The main difference between R-alanine and S-alanine lies in the configuration of the molecule around the chiral carbon center, which is a carbon atom bonded to four different groups. In R-alanine, the hydrogen atom and the carboxyl group (-COOH) are on opposite sides of the chiral carbon center, whereas in S-alanine, they are on the same side.

This difference in configuration affects the physical and chemical properties of the two stereoisomers, including their solubility, reactivity, and biological activity. (S)-Alanine  (L-alanine) is the amino acid used i protein synthesis.

In summary, R-alanine and S-alanine are two stereoisomers of alanine that differ in the arrangement of their atoms around the chiral carbon center, resulting in differences in physical and chemical properties.
IUPAC Name: 2-aminopropanoic acid

test/alanine_RS_stepAna
UUID
81665efa-9d59-41d9-bdc7-5c152d17880f

DNA AT pairing with Hydrogen Bonds

The number of hydrogen bonds between adenine (A) and thymine (T) in DNA is two. This is because the nitrogen-hydrogen (N-H) bond in the ring structure of adenine hydrogen bonds with the carbonyl oxygen (C=O) in the ring structure of thymine and the nitrogen-hydrogen (N-H) bond in the amine group of adenine hydrogen bonds with the nitrogen in the ring structure of thymine.

This hydrogen bonding between A and T is important in the replication of DNA because it helps to ensure the stability of the double helix structure of DNA. This stability is crucial for the proper functioning of the DNA molecule, as it prevents the two complementary strands from separating and disrupting the normal process of DNA replication.

In the replication of DNA, the hydrogen bonds between A and T must break in order for the two complementary strands of DNA to separate and serve as templates for the synthesis of new complementary strands. This process is facilitated by the enzymes responsible for DNA replication, which bind to and break the hydrogen bonds between A and T.

In summary, the two hydrogen bonds between adenine (A) and thymine (T) in DNA play a critical role in maintaining the stability of the double helix structure of DNA, which is crucial for the proper functioning of the DNA molecule and its replication.

test/dna_ATpair_withHbonds
UUID
10a3eada-efee-4d2b-81e7-715fb6c11b69

DNA GC Pairing showing Hydrogen bonds

Hydrogen bonding between guanine (G) and cytosine (C) is a type of weak chemical bond that forms between the nitrogen-hydrogen (N-H) bond in the ring structure of guanine and the nitrogen-hydrogen (N-H) bond in the ring structure of cytosine. This hydrogen bonding helps to stabilize the double helix structure of DNA.

In the replication of DNA, this hydrogen bonding between G and C is critical because it helps to ensure that the two complementary strands of DNA separate and serve as templates for the synthesis of new complementary strands. During replication, the hydrogen bonds between G and C break, allowing the two complementary strands to separate and expose their individual nitrogenous bases to be used as a template for the synthesis of new complementary strands by DNA polymerase enzymes.

In summary, the hydrogen bonding between G and C in DNA plays a crucial role in ensuring the stability of the double helix structure of DNA and in the replication of DNA by facilitating the separation of complementary strands and serving as a template for the synthesis of new complementary strands.

test/dna_GCpair_withHbonds
UUID
00f0f2d6-4796-465b-b518-8d596350426f